Shenglin Mei, PhD
Shenglin Mei, PhD
Research Fellow in Biomedical Informatics, Harvard Medical School
Mentor: Peter Kharchenko, PhD

Shenglin Mei received his PhD in Bioinformatics from Tongji University under the supervision of Professor Xiaole Shirley Liu. Mei's research was focused on gene transcriptional and epigenetic regulation in cancer through multiple genomic data integration. He is currently working on intratumoral heterogeneity and microenvironment in metastatic and primary human tumors based on single-cell sequencing data.

Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute.
Authors: Wang B, Wang M, Zhang W, Xiao T, Chen CH, Wu A, Wu F, Traugh N, Wang X, Li Z, Mei S, Cui Y, Shi S, Lipp JJ, Hinterndorfer M, Zuber J, Brown M, Li W, Liu XS.
Nat Protoc
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Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis.
Authors: Zheng R, Wan C, Mei S, Qin Q, Wu Q, Sun H, Chen CH, Brown M, Zhang X, Meyer CA, Liu XS.
Nucleic Acids Res
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UVR8 Interacts with BES1 and BIM1 to Regulate Transcription and Photomorphogenesis in Arabidopsis.
Authors: Liang T, Mei S, Shi C, Yang Y, Peng Y, Ma L, Wang F, Li X, Huang X, Yin Y, Liu H.
Dev Cell
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Erratum: "Regulation of Chromatin Assembly and Cell Transformation by Formaldehyde Exposure in Human Cells".
Authors: Chen D, Fang L, Mei S, Li H, Xu X, Des Marais TL, Lu K, Liu XS, Jin C.
Environ Health Perspect
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Cistrome Cancer: A Web Resource for Integrative Gene Regulation Modeling in Cancer.
Authors: Mei S, Meyer CA, Zheng R, Qin Q, Wu Q, Jiang P, Li B, Shi X, Wang B, Fan J, Shih C, Brown M, Zang C, Liu XS.
Cancer Res
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Regulation of Chromatin Assembly and Cell Transformation by Formaldehyde Exposure in Human Cells.
Authors: Chen D, Fang L, Mei S, Li H, Xu X, Des Marais TL, Lu K, Liu XS, Jin C.
Environ Health Perspect
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Survival of tissue-resident memory T cells requires exogenous lipid uptake and metabolism.
Authors: Pan Y, Tian T, Park CO, Lofftus SY, Mei S, Liu X, Luo C, O'Malley JT, Gehad A, Teague JE, Divito SJ, Fuhlbrigge R, Puigserver P, Krueger JG, Hotamisligil GS, Clark RA, Kupper TS.
Nature
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Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse.
Authors: Mei S, Qin Q, Wu Q, Sun H, Zheng R, Zang C, Zhu M, Wu J, Shi X, Taing L, Liu T, Brown M, Meyer CA, Liu XS.
Nucleic Acids Res
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CRISPR-DO for genome-wide CRISPR design and optimization.
Authors: Ma J, Köster J, Qin Q, Hu S, Li W, Chen C, Cao Q, Wang J, Mei S, Liu Q, Xu H, Liu XS.
Bioinformatics
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ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline.
Authors: Qin Q, Mei S, Wu Q, Sun H, Li L, Taing L, Chen S, Li F, Liu T, Zang C, Xu H, Chen Y, Meyer CA, Zhang Y, Brown M, Long HW, Liu XS.
BMC Bioinformatics
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