Brett K. Beaulieu-Jones, PhD

Brett Beaulieu-Jones, PhD

Former Instructor in Biomedical Informatics
Former Research Fellow in Neurology, Brigham and Women's Hospital
Biomedical Informatics Research Training Fellow, 2017-2019

Brett Beaulieu-Jones received his PhD from the Perelman School of Medicine at the University of Pennsylvania under the supervision of Dr. Jason Moore and Dr. Casey Greene. Beaulieu-Jones’ doctoral research focused on using machine learning-based methods to more precisely define phenotypes from large-scale biomedical data repositories, e.g. those contained in clinical records. At DBMI he is expanding this concentration to include large-scale data integration (genomic, therapeutic, imaging) to both better understand disease etiology as well as provide precise therapeutic recommendations. Initially, he is working to develop targeted models of drug selection for patients with refractory epilepsy and to further develop machine learning methods that model the way patients progress over time using longitudinal data.  

Multi-center retrospective cohort study applying deep learning to electrocardiograms to identify left heart valvular dysfunction.
Authors: Vaid A, Argulian E, Lerakis S, Beaulieu-Jones BK, Krittanawong C, Klang E, Lampert J, Reddy VY, Narula J, Nadkarni GN, Glicksberg BS.
Commun Med (Lond)
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Severity of Epilepsy and Response to Antiseizure Medications in Individuals With Multiple Sclerosis: Analysis of a Real-World Dataset.
Authors: Villamar MF, Sarkis RA, Pennell P, Kohane I, Beaulieu-Jones BK.
Neurol Clin Pract
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Changes in laboratory value improvement and mortality rates over the course of the pandemic: an international retrospective cohort study of hospitalised patients infected with SARS-CoV-2.
Authors: Hong C, Zhang HG, L'Yi S, Weber G, Avillach P, Tan BWQ, Gutiérrez-Sacristán A, Bonzel CL, Palmer NP, Malovini A, Tibollo V, Luo Y, Hutch MR, Liu M, Bourgeois F, Bellazzi R, Chiovato L, Sanz Vidorreta FJ, Le TT, Wang X, Yuan W, Neuraz A, Benoit V, Moal B, Morris M, Hanauer DA, Maidlow S, Wagholikar K, Murphy S, Estiri H, Makoudjou A, Tippmann P, Klann J, Follett RW, Gehlenborg N, Omenn GS, Xia Z, Dagliati A, Visweswaran S, Patel LP, Mowery DL, Schriver ER, Samayamuthu MJ, Kavuluru R, Lozano-Zahonero S, Zöller D, Tan ALM, Tan BWL, Ngiam KY, Holmes JH, Schubert P, Cho K, Ho YL, Beaulieu-Jones BK, Pedrera-Jiménez M, García-Barrio N, Serrano-Balazote P, Kohane I, South A, Brat GA, Cai T.
BMJ Open
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International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality.
Authors: Weber GM, Hong C, Xia Z, Palmer NP, Avillach P, L'Yi S, Keller MS, Murphy SN, Gutiérrez-Sacristán A, Bonzel CL, Serret-Larmande A, Neuraz A, Omenn GS, Visweswaran S, Klann JG, South AM, Loh NHW, Cannataro M, Beaulieu-Jones BK, Bellazzi R, Agapito G, Alessiani M, Aronow BJ, Bell DS, Benoit V, Bourgeois FT, Chiovato L, Cho K, Dagliati A, DuVall SL, Barrio NG, Hanauer DA, Ho YL, Holmes JH, Issitt RW, Liu M, Luo Y, Lynch KE, Maidlow SE, Malovini A, Mandl KD, Mao C, Matheny ME, Moore JH, Morris JS, Morris M, Mowery DL, Ngiam KY, Patel LP, Pedrera-Jimenez M, Ramoni RB, Schriver ER, Schubert P, Balazote PS, Spiridou A, Tan ALM, Tan BWL, Tibollo V, Torti C, Trecarichi EM, Wang X, Kohane IS, Cai T, Brat GA.
NPJ Digit Med
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Temporal Trends in Clinical Evidence of 5-Year Survival Within Electronic Health Records Among Patients With Early-Stage Colon Cancer Managed With Laparoscopy-Assisted Colectomy vs Open Colectomy.
Authors: Hou J, Zhao R, Cai T, Beaulieu-Jones B, Seyok T, Dahal K, Yuan Q, Xiong X, Bonzel CL, Fox C, Christiani DC, Jemielita T, Liao KP, Liaw KL, Cai T.
JAMA Netw Open
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Packaging Biocomputing Software to Maximize Distribution and Reuse.
Authors: Bush WS, Wheeler N, Darabos C, Beaulieu-Jones B.
Pac Symp Biocomput
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Does Modulation of an Epigenetic Clock Define a Geroprotector?
Authors: Schork NJ, Beaulieu-Jones B, Liang W, Smalley S, Goetz LH.
Adv Geriatr Med Res
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Multinational characterization of neurological phenotypes in patients hospitalized with COVID-19.
Authors: Le TT, Gutiérrez-Sacristán A, Son J, Hong C, South AM, Beaulieu-Jones BK, Loh NHW, Luo Y, Morris M, Ngiam KY, Patel LP, Samayamuthu MJ, Schriver E, Tan ALM, Moore J, Cai T, Omenn GS, Avillach P, Kohane IS, Visweswaran S, Mowery DL, Xia Z.
Sci Rep
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Comment on: Truth and truthiness: evidence, experience and clinical judgement in surgery.
Authors: Marwaha JS, Beaulieu-Jones B, Yuan W, Brat GA.
Br J Surg
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Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data.
Authors: Klann JG, Estiri H, Weber GM, Moal B, Avillach P, Hong C, Tan ALM, Beaulieu-Jones BK, Castro V, Maulhardt T, Geva A, Malovini A, South AM, Visweswaran S, Morris M, Samayamuthu MJ, Omenn GS, Ngiam KY, Mandl KD, Boeker M, Olson KL, Mowery DL, Follett RW, Hanauer DA, Bellazzi R, Moore JH, Loh NW, Bell DS, Wagholikar KB, Chiovato L, Tibollo V, Rieg S, Li ALLJ, Jouhet V, Schriver E, Xia Z, Hutch M, Luo Y, Kohane IS, Brat GA, Murphy SN.
J Am Med Inform Assoc
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