Zak Kohane

Isaac Kohane, MD, PhD

Chair of the Department of Biomedical Informatics, Harvard Medical School
Marion V. Nelson Professor of Biomedical Informatics, Harvard Medical School
Professor of Pediatrics, Boston Children's Hospital

Isaac (Zak) Kohane, MD, PhD is the inaugural Chair of the Department of Biomedical Informatics and the Marion V. Nelson Professor of Biomedical Informatics at Harvard Medical School. He served as co-author of the Institute of Medicine Report on Precision Medicine that has been the template for national efforts. He develops and applies computational techniques to address disease at multiple scales: from whole healthcare systems as “living laboratories” to the functional genomics of neurodevelopment with a focus on autism.

Over the last 30 years, Kohane’s research agenda has been driven by the vision of what biomedical researchers could do to find new cures, provide new diagnoses and deliver the best care available if data could be converted more rapidly to knowledge and knowledge to practice. In so doing, he has designed and led multiple internationally adopted efforts to “instrument” the healthcare enterprise for discovery and to enable innovative decision-making tools to be applied to the point of care. At the same time, the new insights afforded by ’omic-scale molecular analyses have inspired him and his collaborators to work on re-characterizing and reclassifying diseases such as autism, rheumatoid arthritis and cancers. In many of these studies, the developmental trajectories of thousands of genes have been a powerful tool in unraveling complex diseases.

In 1987, Kohane earned his MD/PhD from Boston University and then completed his post-doctoral work at Boston Children’s Hospital, where he has since worked as a pediatric endocrinologist. He joined the faculty at Harvard Medical School in 1992, serving as Director of Countway Library from 2005 to 2015 and as Co-Director of the Center for Biomedical Informatics during the same period, before it became the Department of Biomedical Informatics in July 2015. He is a member of the Institute of Medicine and the American Society for Clinical Investigation. Kohane has published several hundred papers in the medical literature and authored the widely-used books Microarrays for an Integrative Genomics (2003) and The AI Revolution in Medicine: GPT-4 and Beyond (2023). He is also Editor-in-Chief of NEJM AI.

Kohane is always on the lookout for like-minded “quants” who share the same goals to bring a better future for medicine and biomedical science to the present.

Current Postdoctoral Fellowship Opportunities
DBMI Research Areas
DBMI Courses
CrossChip: a system supporting comparative analysis of different generations of Affymetrix arrays.
Authors: Kong SW, Hwang KB, Kim RD, Zhang BT, Greenberg SA, Kohane IS, Park PJ.
Bioinformatics
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Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
Authors: Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.
BMC Bioinformatics
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MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes.
Authors: Marinescu VD, Kohane IS, Riva A.
BMC Bioinformatics
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Side population cells isolated from different tissues share transcriptome signatures and express tissue-specific markers.
Authors: Liadaki K, Kho AT, Sanoudou D, Schienda J, Flint A, Beggs AH, Kohane IS, Kunkel LM.
Exp Cell Res
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Reverse geocoding: concerns about patient confidentiality in the display of geospatial health data.
Authors: Brownstein JS, Cassa CA, Kohane IS, Mandl KD.
AMIA Annu Symp Proc
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DITTO - a tool for identification of patient cohorts from the text of physician notes in the electronic medical record.
Authors: Turchin A, Pendergrass ML, Kohane IS.
AMIA Annu Symp Proc
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The MAPPER database: a multi-genome catalog of putative transcription factor binding sites.
Authors: Marinescu VD, Kohane IS, Riva A.
Nucleic Acids Res
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Mechanical stretch is a highly selective regulator of gene expression in human bladder smooth muscle cells.
Authors: Adam RM, Eaton SH, Estrada C, Nimgaonkar A, Shih SC, Smith LE, Kohane IS, Bägli D, Freeman MR.
Physiol Genomics
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The asthma kiosk: a patient-centered technology for collaborative decision support in the emergency department.
Authors: Porter SC, Cai Z, Gribbons W, Goldmann DA, Kohane IS.
J Am Med Inform Assoc
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Training the next generation of informaticians: the impact of "BISTI" and bioinformatics--a report from the American College of Medical Informatics.
Authors: Friedman CP, Altman RB, Kohane IS, McCormick KA, Miller PL, Ozbolt JG, Shortliffe EH, Stormo GD, Szczepaniak MC, Tuck D, Williamson J.
J Am Med Inform Assoc
View full abstract on Pubmed