Chirag Patel
Chirag Patel, PhD
Assistant Professor of Biomedical Informatics
10 Shattuck Street, Boston, MA 02115

Chirag Patel's long-term research goal is to address problems in human health and disease by developing computational and bioinformatics methods to reproducibly and efficiently reason over high-throughput data streams spanning molecules to populations. Patel's group aims to dissect inter-individual differences in human phenomes through strategies that integrate data sources that capture the comprehensive clinical experience (e.g., through the electronic medical record), the complex phenomena of environmental exposure (e.g., high-throughput measures of the exposome), and inherited genomic variation. He received his doctorate in biomedical informatics from Stanford University.


DBMI Research Programs
DBMI Courses
Trypsin encoding PRSS1-PRSS2 variation influence the risk of asparaginase-associated pancreatitis in children with acute lymphoblastic leukemia: a Ponte di Legno toxicity working group report.
Authors: Wolthers BO, Frandsen TL, Patel CJ, Abaji R, Attarbaschi A, Barzilai S, Colombini A, Escherich G, Grosjean M, Krajinovic M, Larsen E, Liang DC, Möricke A, Rasmussen KK, Samarasinghe S, Silverman LB, van der Sluis IM, Stanulla M, Tulstrup M, Yadav R, Yang W, Zapotocka E, Gupta R, Schmiegelow K.
Haematologica
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Using Big Data to Determine Reference Values for Laboratory Tests-Reply.
Authors: Manrai AK, Patel CJ, Ioannidis JPA.
JAMA
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Model-averaged confounder adjustment for estimating multivariate exposure effects with linear regression.
Authors: Wilson A, Zigler CM, Patel CJ, Dominici F.
Biometrics
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Toward Capturing the Exposome: Exposure Biomarker Variability and Coexposure Patterns in the Shared Environment.
Authors: Chung MK, Kannan K, Louis GM, Patel CJ.
Environ Sci Technol
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In the Era of Precision Medicine and Big Data, Who Is Normal?
Authors: Manrai AK, Patel CJ, Ioannidis JPA.
JAMA
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Aether: leveraging linear programming for optimal cloud computing in genomics.
Authors: Luber JM, Tierney BT, Cofer EM, Patel CJ, Kostic AD.
Bioinformatics
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Systematic identification of correlates of HIV infection: an X-wide association study.
Authors: Patel CJ, Bhattacharya J, Ioannidis JPA, Bendavid E.
AIDS
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Rcupcake: an R package for querying and analyzing biomedical data through the BD2K PIC-SURE RESTful API.
Authors: Gutiérrez-Sacristán A, Guedj R, Korodi G, Stedman J, Furlong LI, Patel CJ, Kohane IS, Avillach P.
Bioinformatics
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Computational repositioning and preclinical validation of mifepristone for human vestibular schwannoma.
Authors: Sagers JE, Brown AS, Vasilijic S, Lewis RM, Sahin MI, Landegger LD, Perlis RH, Kohane IS, Welling DB, Patel CJ, Stankovic KM.
Sci Rep
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Leveraging Population-Based Clinical Quantitative Phenotyping for Drug Repositioning.
Authors: Brown AS, Rasooly D, Patel CJ.
CPT Pharmacometrics Syst Pharmacol
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